CDS

Accession Number TCMCG007C51297
gbkey CDS
Protein Id XP_009111408.1
Location join(16233..16403,16528..16664,16737..16836,16901..17030,17112..17175,19371..20289,20373..20646,20715..21199,21286..21358,21450..21535,21614..21733,21848..21952)
Gene LOC103836863
GeneID 103836863
Organism Brassica rapa

Protein

Length 887aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009113160.3
Definition lysine-specific demethylase JMJ25 isoform X1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category K
Description transcription factor jumonji (jmjC) domain-containing protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K15601        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04714        [VIEW IN KEGG]
map04714        [VIEW IN KEGG]
GOs GO:0000785        [VIEW IN EMBL-EBI]
GO:0000976        [VIEW IN EMBL-EBI]
GO:0001067        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003682        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005102        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005506        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0006081        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006482        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0008134        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008214        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009755        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0014070        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016569        [VIEW IN EMBL-EBI]
GO:0016570        [VIEW IN EMBL-EBI]
GO:0016577        [VIEW IN EMBL-EBI]
GO:0016999        [VIEW IN EMBL-EBI]
GO:0017000        [VIEW IN EMBL-EBI]
GO:0017144        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0030518        [VIEW IN EMBL-EBI]
GO:0030521        [VIEW IN EMBL-EBI]
GO:0030522        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031490        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032451        [VIEW IN EMBL-EBI]
GO:0032452        [VIEW IN EMBL-EBI]
GO:0032454        [VIEW IN EMBL-EBI]
GO:0032870        [VIEW IN EMBL-EBI]
GO:0033169        [VIEW IN EMBL-EBI]
GO:0033993        [VIEW IN EMBL-EBI]
GO:0035257        [VIEW IN EMBL-EBI]
GO:0035258        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043169        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043401        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043565        [VIEW IN EMBL-EBI]
GO:0044212        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044283        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045893        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0046184        [VIEW IN EMBL-EBI]
GO:0046292        [VIEW IN EMBL-EBI]
GO:0046293        [VIEW IN EMBL-EBI]
GO:0046872        [VIEW IN EMBL-EBI]
GO:0046914        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048545        [VIEW IN EMBL-EBI]
GO:0050681        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051427        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070076        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0070988        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071383        [VIEW IN EMBL-EBI]
GO:0071396        [VIEW IN EMBL-EBI]
GO:0071407        [VIEW IN EMBL-EBI]
GO:0071495        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:1990837        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGGAAAGGAAGGGTAAGCGAATTAGGTCCGAGGAAGACCCCCCGAGATCTTCTGACAAGCGACGTAAGACGAGGAAGAAGGAAGAGGAGAATGTCGTGAGCAGAAGAGGATCTTCGAGTTCTGAGGGAAGAAGAAGAGGAAGAGACATGTCTTCTTCACCCGACAAGGATGAGTCTGAAGGAAGAAGAAAGTATGCTGGTTTGACTTGTCATCAGTGTAAGATCATGATGAGTAGTAAGACTGATCTTGTCTTCTGTTCAATATGTGTCAATAAGCGCTACTGCAAGGACTGCATCAAGAGATGGTATCCAGAGAGAACGCCTGAGGGAGTTAAAGCTGCTTGTCCTTTCTGTATGGGGAATTGCAACTGCAGAGCTTGTCTGCGAGAGCCTTTGGCTGTCAAGATACAAAGTGGAAAGGATGATAATGTCAAGCTCAAGCAGTTGCAGTACCTATTAGTTAAAGTCCTTCCTGTTCTTAGGGCTATTTACACTGAGCAAAGCCGTGAACTTGAGATTGAAGCAGCGATTAGAGGAGTGCCTGTGACAGAATCTGATGTTGCTAAGTGCGAGATTCATCCAAGTGTACGCATATACTGTGACCTCTGCAGCACATCCATTGCCAATTTTCTCAGAAGCTGTCAGAACCAAGATTGTTCATCAGACATATGTCTCTCTTGCTGCAATGAACTGAGAGATGGGGAGAGTTTCTCTAGCTGGAAGCTTAACTCTGACGGTACCATTCCCTGCCCTCCAAAGGAACGTGGTGGTTGTGGTACCTCAACACTGGAGTTGAGACGTTTGCGCAAACGTGATTTGGTCCAAAAACTGATAACCGATGCAGAGGAACTTACTCAACAGTTTAAACCACCGGATGTGGATACTGCTCATGAATGTTCCTCATGTTCTGATTCCATTACAAGGCAGGCGGCTTCTAGGAAGAACGGTCATGATAACTTCTTATACTCCCCAACCGCTCTTGATCTAGCTGAAGACGACAATGCTCATTTTCAGTCGCATTGGATAAAGGCAGAGCCTGTTATAGTCAGAAACGTTCTGGAGAAGACGTCTGGACTAAGCTGGGAGCCAATGGTTATGTGGAGAGCCTGTAGAGAAATGGATCCAAAGGCTAAATGCAAAGGAGAGGCCAAAGCTGTGAAGGCTGTGGATTGCTTGGACTGGTGTGAGGTTGAGATAAACATTCATCAGTTTTTCGATGGCTACTTAAAAGGGAGAATGCATTGCAACGGTTGGCCAGAGATGTTGAAACTGAAGGATTGGCCTCCATCAGCTTTGTTTGAAGAGCGTCTTCCAAGGCATAATGATGAGTTTATGTCTGCGTTGCCTTTCTTTGATTACACTGATCCAGAGTCTGGTATCTTCAATCTTGCAACAAGACTTCCAGATGGATCCTTGAAGCCAGATCTTGGACCAAAGACATATATTGCTTATGGTTTCCATGAAGAGCTTAATAGAGGAGACTCTGTGACAAAGCTACATTGTGATGTTTCTGACGCGGTGAATGTGCTGACACACACTGCTAAAGTGGATTTAACTCCCAGACAATACCAAAAGATAAAATTAGAACAGAAAAGCTACGCAAAAGCACAATTGCGTAAACAACAGAAAAACAAGTCACTGGGAGAAGTGGATAAAGATGAAATAATCTTGATTGAGAATGAGGAAGATTTAAAGAATTGCAATGGTCTTTTGGGGGAACACAGCTTGAAGGATAAAGCAGCTAAGGAAGAATCATCATATAGCATTCCTGGACCGTCCAGCTCACAAAAAGGTGAATGTATTAACATTGGAAGAGCTGATGATCCTAAGGAAGGATCTTCTAGTTTGAATTCTTGCACTGTTGCTATGGAGTCAGGTCATGATACAAAGGTGGATGTGGGTTTGATAACTCAGAAGAATGTAACAGTGAAACGCGAATCAGTTGCTGACGAGAATCATGATGATGTCTGTTTGAAGACAGAGATATCATCTCCAAGTCAAAGAGAAGCTGATTCCGCGGTGGAGAATGAACTAAACATGCCAACACTTCCTTCTACTCTTCCACAACCTGTTGTGAGTACAAGTGCGGAATCCATAGAAGAGGAGAAACTAGATGCTCCAATAGAAACTAATGGCAATGCCAATGAGAGTACAAAGGCTGTGCATGGTGGTGCTGTGTGGGACATCTTCCGAAGAGAGGATGTTCCAAAACTTATCGAGTATTTGAAAAGGCACAAGCATGAGTTTCGTCACCTCTATAACGAACCTGTGAAATCTGTGTCACACCCAATTCATGACCAGAGTATGTTCTTGAATGAAAGACAGAAGAAACAGCTGAAGGAGGAGTTTGATATAGAACCATGGACCTTTGTGCAACACCTCGGTGAAGCTGTCTTTATCCCTGCCGGTTGTCCTCACCAAGTGAGGAACATACAGTCTTGCATAAAGGTGGCATTAGATTTTGTTGCTCCTGAAAGCGTAGAGGAATGCCTTAGGCTAACAGAGGAGTTCCGGAGACTACCTAAAGACCACAAATCCAACGAAGATAAACTAGAGCTTAAGAAAATAGTGCTGCATGCTGCCAGATCGGCCATAAGAGAGGCACAAGATCTAATGCAAACAAAGACGGTAACAAAAGACCGAAAAGGTTCTTCAACTTAG
Protein:  
MEERKGKRIRSEEDPPRSSDKRRKTRKKEEENVVSRRGSSSSEGRRRGRDMSSSPDKDESEGRRKYAGLTCHQCKIMMSSKTDLVFCSICVNKRYCKDCIKRWYPERTPEGVKAACPFCMGNCNCRACLREPLAVKIQSGKDDNVKLKQLQYLLVKVLPVLRAIYTEQSRELEIEAAIRGVPVTESDVAKCEIHPSVRIYCDLCSTSIANFLRSCQNQDCSSDICLSCCNELRDGESFSSWKLNSDGTIPCPPKERGGCGTSTLELRRLRKRDLVQKLITDAEELTQQFKPPDVDTAHECSSCSDSITRQAASRKNGHDNFLYSPTALDLAEDDNAHFQSHWIKAEPVIVRNVLEKTSGLSWEPMVMWRACREMDPKAKCKGEAKAVKAVDCLDWCEVEINIHQFFDGYLKGRMHCNGWPEMLKLKDWPPSALFEERLPRHNDEFMSALPFFDYTDPESGIFNLATRLPDGSLKPDLGPKTYIAYGFHEELNRGDSVTKLHCDVSDAVNVLTHTAKVDLTPRQYQKIKLEQKSYAKAQLRKQQKNKSLGEVDKDEIILIENEEDLKNCNGLLGEHSLKDKAAKEESSYSIPGPSSSQKGECINIGRADDPKEGSSSLNSCTVAMESGHDTKVDVGLITQKNVTVKRESVADENHDDVCLKTEISSPSQREADSAVENELNMPTLPSTLPQPVVSTSAESIEEEKLDAPIETNGNANESTKAVHGGAVWDIFRREDVPKLIEYLKRHKHEFRHLYNEPVKSVSHPIHDQSMFLNERQKKQLKEEFDIEPWTFVQHLGEAVFIPAGCPHQVRNIQSCIKVALDFVAPESVEECLRLTEEFRRLPKDHKSNEDKLELKKIVLHAARSAIREAQDLMQTKTVTKDRKGSST